Enhancing agrobiodiversity offers a suite of functions key to the sustainability of low input agroecosystems. The pairing of shade trees in pan-tropical tree-crop systems represents one of the most common and widespread applications of agroecosystem diversification, yet given the vastly heterogeneous conditions in which shade tree selection is made, generalizable advances in the identification of suitably paired tree-crop and shade tree is essential for performance and adoption. Here, we determine the phylogenetic distance between 78 reported shade tree genera and the dominant tree-crop, Theobroma cacao L (cocoa), across four countries in sub-Sahara Africa. We hypothesize that shade trees classified as desirable will be phylogenetically distant from T. cacao, based on the well-established theory that disparate evolutionary histories confer niche differentiation. Our analyses confirm that shade tree taxa categorized as desirable by farmers and institutions present higher phylogenetic distance with T. cacao than shade trees taxa categorized as undesirable. These results demonstrate that shade tree evolutionary distance to the target crop could be a useful tool to predict a taxon’s a priori suitability in cocoa agroforests, as well as the ability of phylogenetic analyses in prescribing appropriate shade trees in other current and future agroforestry systems.

https://dx.doi.org/10.1016/j.agee.2020.107125

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Richard Asarehttps://orcid.org/0000-0001-6798-7821

https://dx.doi.org/10.1016/j.agee.2020.107125

Natural Resource Management

Aflatoxin; Agronomy; Cocoa; Natural Resource Management

Agrobiodiversity; Agroecosystems; Farmers; Decision Making; Indigenous Knowledge; Phylogeny; Theobroma Cacao

Africa; West Africa

Cameroon; Ghana; Nigeria

Headquarters and Western Africa Hub

Agriculture, Ecosystems and Environment