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Genome-wide association study for yield and quality of granulated cassava processed product

dc.contributor.authorAghogho, C.I.
dc.contributor.authorKayondo, S.I.
dc.contributor.authorEleblu, J.S.Y.
dc.contributor.authorIge, A.
dc.contributor.authorAsante, I.
dc.contributor.authorOffei, S.K.
dc.contributor.authorParkes, E.
dc.contributor.authorEgesi, C.N.
dc.contributor.authorMbanjo, E.
dc.contributor.authorShah, T.
dc.contributor.authorKulakow, P.
dc.contributor.authorRabbi, I.Y.
dc.date.accessioned2024-10-14T09:43:59Z
dc.date.available2024-10-14T09:43:59Z
dc.date.issued2024-06
dc.identifier.citationAghogho, C.I., Kayondo, S.I., Eleblu, S.J., Ige, A., Asante, I., Offei, S.K., ... & Rabbi, I.Y. (2024). Genome‐wide association study for yield and quality of granulated cassava processed product. Plant Genome, 17(2): e20469, 1-19.
dc.identifier.issn1940-3372
dc.identifier.urihttps://hdl.handle.net/20.500.12478/8597
dc.description.abstractThe starchy storage roots of cassava are commonly processed into a variety of products, including cassava granulated processed products (gari). The commercial value of cassava roots depends on the yield and quality of processed products, directly influencing the acceptance of new varieties by farmers, processors, and consumers. This study aims to estimate genetic advance through phenotypic selection and identify genomic regions associated and candidate genes linked with gari yield and quality. Higher single nucleotide polymorphism (SNP)-based heritability estimates compared to broad-sense heritability estimates were observed for most traits highlighting the influence of genetic factors on observed variation. Using genome-wide association analysis of 188 clones, genotyped using 53,150 genome-wide SNPs, nine SNPs located on seven chromosomes were significantly associated with peel loss, gari yield, color parameters for gari and eba, bulk density, swelling index, and textural properties of eba. Future research will focus on validating and understanding the functions of identified genes and their influence on gari yield and quality traits.
dc.description.sponsorshipBill & Melinda Gates Foundation
dc.description.sponsorshipDeutscher Akademischer Austauschdienst
dc.format.extent1-19
dc.language.isoen
dc.subjectGenome-Wide Association Studies
dc.subjectCassava
dc.subjectYields
dc.subjectSingle Nucleotide Polymorphisms
dc.titleGenome-wide association study for yield and quality of granulated cassava processed product
dc.typeJournal Article
cg.contributor.crpRoots, Tubers and Bananas
cg.contributor.affiliationUniversity of Ghana
cg.contributor.affiliationInternational Institute of Tropical Agriculture
cg.contributor.affiliationUniversity of Minnesota
cg.contributor.affiliationNational Root Crops Research Institute, Nigeria
cg.coverage.regionAfrica
cg.coverage.regionWest Africa
cg.coverage.countryNigeria
cg.coverage.hubHeadquarters and Western Africa Hub
cg.researchthemeBiotech and Plant Breeding
cg.identifier.bibtexciteidAGHOGHO:2024
cg.authorship.typesCGIAR and developing country institute
cg.iitasubjectAgronomy
cg.iitasubjectCassava
cg.iitasubjectFood Security
cg.iitasubjectPlant Breeding
cg.iitasubjectPlant Production
cg.journalPlant Genome
cg.notesOpen Access Journal
cg.accessibilitystatusOpen Access
cg.reviewstatusPeer Review
cg.usagerightslicenseCreative Commons Attribution 4.0 (CC BY 0.0)
cg.targetaudienceScientists
cg.identifier.doihttps://doi.org/10.1002/tpg2.20469
cg.iitaauthor.identifierKayondo Siraj Ismail: 0000-0002-3212-5727
cg.iitaauthor.identifierE J Parkes: 0000-0003-4063-1483
cg.iitaauthor.identifierTrushar Shah: 0000-0002-0091-7981
cg.iitaauthor.identifierPeter Kulakow: 0000-0002-7574-2645
cg.iitaauthor.identifierIsmail Rabbi: 0000-0001-9966-2941
cg.futureupdate.requiredNo
cg.identifier.issue2: e20469
cg.identifier.volume17


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